Nigeria's President Muhammadu Buhari has appointed new defence chiefs after sacking the heads of the army, navy and air force.
The Islamists have recently launched a series of deadly guerrilla attacks, killing more than 250 people.
Boko Haram is thought to be responsible for more than 10,000 deaths since 2009.
The new military chiefs will be expected to work closely with neighbours Chad, Cameroon and Niger as they join forces to tackle Boko Haram.
The group has also stepped up attacks on these countries.
At least 12 civilians were killed in Cameroon in a suspected Boko Haram suicide attack on Sunday evening, a military source told the BBC.
Two soldiers also died, along with two bombers who blew themselves up in Fotokol, near the border with Nigeria.
Chad will be the headquarters of an expanded Nigeria-led regional force of around 7,500 troops.
Its formation has gained momentum since President Buhari took office in May.
On Saturday morning, 15 people died in the main market in Chad's capital, N'Djamena, when a man dressed in a burka blew himself up.
Boko Haram claimed responsibility for the attack.
The BBC's Nigeria correspondent, Will Ross, says just hours before his sacking, army chief Lt Gen Kenneth Minima said the upsurge in violence was the result of military success against the jihadists.
Lt Gen Minima suggested Boko Haram no longer had the capacity to fight the army and so had resorted to attacking soft targets with bomb blasts.
bbc.com
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